Publication Archives - Page 65 of 68 - New York Genome Center

Human Molecular Genetics 23: 4693-702 · February 2, 2015

Genome-wide mapping of identical-by-descent segments in an Ashkenazi PD cohort identifies associated haplotypes.

Vacic V, Ozelius LJ, Clark LN, Bar-Shira A, Gana-Weisz M, Gurevich T, Gusev A, Kedmi M, Kenny EE, Liu X, Mejia-Santana H, Mirelman A, Raymond D, Saunders-Pullman R, Desnick RJ, Atzmon G, Burns ER, Ostrer H, Hakonarson H, Bergman A, Barzilai N, Darvasi A, Peter I, Guha S, Lencz T, Giladi N, Marder K, Pe’er I, Bressman SB, Orr-Urtreger A.

Nature Communications 5: 3650 · February 2, 2015

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.

Corominas R, Yang X, Lin GN, Kang S, Shen Y, Ghamsari L, Broly M, Rodriguez M, Tam S, Trigg SA, Fan C, Yi S, Tasan M, Lemmens I, Kuang X, Zhao N, Malhotra D, Michaelson JJ, Vacic V, Calderwood MA, Roth FP, Tavernier J, Horvath S, Salehi-Ashtiani K, Korkin D, Sebat J, Hill DE, Hao T, Vidal M, Iakoucheva LM.

Science 343:1010-4 · February 2, 2015

Detection of a recurrent DNAJB1-PRKACA chimeric transcript in fibrolamellar hepatocellular carcinoma.

Honeyman JN, Simon EP, Robine N, Chiaroni-Clarke R, Darcy DG, Lim IIP, Gleason CE, Murphy JM, Rosenberg BR, Teegan L, Takacs CN, Botero S, Belote R, Germer S, Emde A-K, Vacic V, Bhanot U, LaQuaglia MP, Simon SM.

Computational Biology Lab

Cell 158: 705-21 · February 2, 2015

Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences.

Cox LM, Yamanishi S, Sohn J, Alekseyenko AV, Leung JM, Cho I, Kim SG, Li H, Gao Z, Mahana D,Zárate Rodriguez JG, Rogers AB, Robine N, Loke P, Blaser MJ.

Computational Biology Lab

Nature Methods 11: 1033-6 · February 2, 2015

Accurate de novo and transmitted indel detection in exome-capture data using microassembly.

Narzisi G, O’Rawe JA, Iossifov I, Fang H, Lee YH, Wang Z, Wu Y, Lyon GJ, Wigler M, Schatz MC.

Iossifov Lab Wigler Lab

Computational Biology Lab

Science 344: 921-5 · February 2, 2015

The cellular and molecular origin of tumor-associated macrophages.

Franklin RA, Liao W, Sarkar A, Kim MV, Bivona MR, Liu K, Pamer EG, Li MO.

Computational Biology Lab

PLoS Computational Biology 8: e1002709 · February 2, 2015

Disease-associated mutations disrupt functionally important regions of intrinsic protein disorder.

Vacic V, Markwick PRL, Oldfield CJ, Zhao X, Haynes C, Uversky VN, Iakoucheva LM.

Journal of Translational Medicine · February 2, 2015

Dendritic cell vaccines containing lymphocytes produce improved immunogenicity in patients with cancer.

Frank, M. O., Kaufman, J., Parveen, S., Blachère, N. E., Orange, D. E., Darnell, R. B.

Phatnani Lab

Elife. · June 4, 2014

Loss of the multifunctional RNA-binding protein RBM47 as a source of selectable metastatic traits in breast cancer.

Vanharanta S, Marney CB, Shu W, Valiente M, Zou Y, Mele A, Darnell RB, Massagué J.

Nat Protoc · January 30, 2015

Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis.

Moore, M. J., Zhang, C., Gantman, E. C., Mele, A., Darnell, J. C. & Darnell, R. B.