Publication Archives - Page 67 of 82 - New York Genome Center

Nature · October 11, 2017

Landscape of X chromosome inactivation across human tissues.

Tukiainen T, Villani AC, Yen A, Rivas MA, Marshall JL, Satija R, Aguirre M, Gauthier L, Fleharty M, Kirby A, Cummings BB, Castel SE, Karczewski KJ, Aguet F, Byrnes A; GTEx Consortium; Laboratory, Data Analysis &Coordinating Center (LDACC)—Analysis Working Group; Statistical Methods groups—Analysis Working Group; Enhancing GTEx (eGTEx) groups; NIH Common Fund; NIH/NCI; NIH/NHGRI; NIH/NIMH; NIH/NIDA; Biospecimen Collection Source Site—NDRI; Biospecimen Collection Source Site—RPCI; Biospecimen Core Resource—VARI; Brain Bank Repository—University of Miami Brain Endowment Bank; Leidos Biomedical—Project Management; ELSI Study; Genome Browser Data Integration &Visualization—EBI; Genome Browser Data Integration &Visualization—UCSC Genomics Institute, University of California Santa Cruz, Lappalainen T, Regev A, Ardlie KG, Hacohen N, MacArthur DG.

Genome Research · October 11, 2017

Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change.

Mohammadi P, Castel SE, Brown AA, Lappalainen T.

Lappalainen Lab

Molecular Cell · October 5, 2017

High-Throughput Approaches to Pinpoint Function within the Noncoding Genome.

Montalbano A, Canver, MC and Sanjana NE.

Sanjana Lab

Nature · March 5, 2018

Developmental diversification of cortical inhibitory interneurons.

Mayer C, Hafemeister C, Bandler RC, , Allaway K, , Brito RB, Butler A, , Satija R.

Satija Lab

Communications Biology · March 22, 2018

Lancet: genome-wide somatic variant calling using localized colored DeBruijn graphs.

Narzisi G, Corvelo A, Arora K, Bergmann E, Shah M, Musunuri R, Emde, A-K, Robine N, Vacic V, Zody MC.

Computational Biology Lab

Cell · September 28, 2017

Genomic Patterns of De Novo Mutation in Simplex Autism.

Turner TN, Coe BP, Dickel DE, Hoekzema K, Nelson BJ, Zody MC, Kronenberg ZN, Hormozdiari F, Raja A, Pennacchio LA, Darnell RB,
Eichler EE.

Computational Biology Lab

Nature Genetics · September 11, 2017

Interpreting short tandem repeat variations in humans using mutational constraint.

Gymrek M, Willems T, Reich D, Erlich Y.

Genome Research · August 9, 2018

Whole-Genome Bisulphite Sequencing With Improved Accuracy and Cost

Suzuki M, Liao W, Wos F, Johnston AD, DeGrazia J, Ishii J, Bloom T, Zody MC, Germer S, Greally JM.

Computational Biology Lab

PLOS Biology · December 30, 2018

Enabling Precision Medicine via standard communication of NGS provenance, analysis, and results.

Alterovitz G, Dean DA II, Goble C, Crusoe MR, Soiland-Reyes S, Bell A, Hayes A, King CHS IV, Johanson E, Thompson EE, Donaldson E, Tsang HS, Goecks J, Almeida JS, Guo L, Walderhaug M, Walsh P, Kahsay R, Bloom T, Lai Y, Simonyan V, Mazumder R.

Computational Biology Lab

Nature Genetics · August 20, 2018

Modified penetrance of coding variants by cis-regulatory variation shapes human traits.

Castel SE, Cervera A, Mohammadi P, Aguet F, Reverter F, Wolman A, Guigo R, Vasileva A, Lappalainen T.