Publication Archives - Page 63 of 67 - New York Genome Center

Proc Natl Acad Sci USA · May 21, 2015

Structural insights into mis-regulation of protein kinase A in human tumors

Cheung J, Ginter C, Cassidy M, Franklin MC, Rudolph MJ, Robine N, Darnell RB, Hendrickson WA.

Bioinformatics · May 21, 2015

Assessing allele-specific expression across multiple tissues from RNA-seq read data

Pirinen M, Lappalainen T, Zaitlen NA; GTEx Consortium, Dermitzakis ET, Donnelly P, McCarthy MI, Rivas MA.

Lappalainen Lab

Cold Spring Harb Perspect Biol · May 21, 2015

Astrocytes in Neurodegenerative Disease.

Phatnani H, Maniatis T.

Phatnani Lab

Nature Biotechnology · May 20, 2015

Spatial reconstruction of single-cell gene expression data

Satija R, Farrell JA, Gennert D, Schier AF, Regev A

Genetics 193: 911-28 · February 8, 2015

The variance of identity-by-descent sharing in the Wright-Fisher model.

Carmi S, Palamara PF, Vacic V, Lencz T, Darvasi A, Pe’er I.

Nature · February 2, 2015

Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile

Buffie CG, Bucci V, Stein RR, McKenney PT, Ling L, Gobourne A, No D, Liu H, Kinnebrew M, Viale A, Littmann E, van den Brink MRM, Jenq RR, Taur Y, Sander C, Cross J, Toussaint NC, Xavier JB, Pamer E.

Transplantation 98: 697-705 · February 2, 2015

Gut Microbial Community Structure and Complications Following Kidney Transplantation: A Pilot Study.

Lee JR, Muthukumar T, Dadhania D, Toussaint NC, Ling L, Pamer E, Suthanthiran M.

Pigment Cell Melanoma Research 27: 671-3 · February 2, 2015

In melanoma, Hippo signaling is affected by copy number alterations and YAP1 overexpression impairs patient survival.

Menzel M, Meckbach D, Weide B, Toussaint NC, Schilbach K, Noor S, Eigentler T, Ikenberg K, Busch C, Qunitanilla-Martinez L, Göke S, Göke F, Handgretinger R, Ottmann C, Bastian B, Garbe C, Röcken M, Perner S, Kohlbacher O, Bauer J.

Genome Biology 15: 454 · February 2, 2015

Comparative sequencing analysis reveals high genomic concordance between matched primary and metastatic colorectal cancer lesions.

Brannon AR, Vakiani E, Sylvester BE, Scott SN, McDermott G, Shah RN, Kania K, Viale A, Oschwald DM, Vacic V, Emde A-K, Cercek A, Yaeger R, Kemeny NE, Saltz LB, Shia J, D‘Angelica MI, Weiser MR, Solit DB, Berger MF.

Computational Biology Lab

Molecular Genetics & Genomic Medicine 2: 438-50 · February 2, 2015

Disease variants in genomes of 44 centenarians.

Freudenberg-Hua Y, Freudenberg J, Vacic V, Abhyankar A, Emde A-K, Ben-Avraham D, Barzilai N, Oschwald DM, Christen E, Koppel J, Greenwald B, Darnell RB, Germer S, Atzmon G, Davies P.

Computational Biology Lab