Publication Archives - Page 62 of 82 - New York Genome Center

Nature Genetics · December 11, 2017

Annotation-free quantification of RNA splicing using LeafCutter.

Li YI, Knowles DA, Humphrey J, Barbeira AN, Dickinson SP, Im HK, Pritchard JK.

Nature Methods · May 22, 2017

Allele-specific expression reveals interactions between genetic variation and environment.

Knowles DA, Davis JR, Edgington H, Raj A, Favé MJ, Zhu X, Potash JB, Weissman MM, Shi J, Levinson DF, Awadalla P, Mostafavi S, Montgomery SB, Battle A.

Knowles Lab

Elife · May 8, 2018

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes.

Knowles DA, Burrows CK, Blischak JD, Patterson KM, Serie DJ, Norton N, Ober C, Pritchard JK, Gilad Y.

Nature · July 3, 2019

Somatic mutations and cell identity linked by Genotyping of Transcriptomes

Nam AS, Kim K-T, Chaligne R, Izzo F, Ang C, Abu-Zeinah G, Omans ND, Pastore A, Taylor J, Alonso A, Mariani M, Cubillos-Ruiz JR, Tam W, Hoffman R, .Scandura, JM, Rabadan R, Abdel-Wahab O, Smibert P, Landau DA.

Landau Lab

Cancer

Nature · September 24, 2018

Discovery of a periosteal stem cell mediating intramembranous bone formation.

Debnath S, Yallowitz AR, McCormick J, Lalani S, Zhang T, Xu R, Li N, Liu Y, Yang YS, Eiseman M, Shim JH, Hameed M, Healey JH, Bostrom MP, Landau DA, Greenblatt MB.

Nature Communications · October 2, 2018

Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects.

Regier AA, Farjoun Y, Larson DE, Krasheninina O, Kang HM, Howrigan DP, Chen BJ, Kher M, Banks E, Ames DC, English AC, Li H, Xing J, Zhang Y, Matise T, Abecasis GR, Salerno W, Zody MC, Neale BM, Hall IM.

Computational Biology Lab

The Journal of experimental medicine · October 5, 2018