Publications - New York Genome Center

Trends in Genetics 30: 377-89 · January 30, 2015

Toward a new history and geography of human informed by ancient DNA.

Pickrell JK, Reich D.

Genome Research 19, 826—837 · January 30, 2015

Signals of recent positive selection in a worldwide sample of human populations.

Pickrell JK, Coop, G., Novembre, J., Kudaravalli, S., Li, J.Z., Absher, D., Srinivasan, B.S., Barsh, G.S., Myers, R.M., Feldman, M.W., Pritchard, J.K.

Nature Communications 3, 1143 · January 30, 2015

The genetic prehistory of southern Africa.

Pickrell JK, Patterson, N., Barbieri, C., Berthold, F., Gerlach, L., Güldemann, T., Kure, B., Mpoloka, S.W., Nakagawa, H., Naumann, C., Lipson, M., Loh, P.-R., Lachance, J., Mountain, J., Bustamante, C.D., Berger, B., Tishkoff, S.A., Henn, B.M., Stoneking, M., Reich, D., Pakendorf, B., 2012.

PLoS Genetics 8, e1002967 · January 30, 2015

Inference of population splits and mixtures from genome-wide allele frequency data.

Pickrell, J.K., Pritchard, J.K., 2012.

January 30, 2015

Ancient west Eurasian ancestry in southern and eastern Africa.

Pickrell et al.

PLoS Genetics 6, e1001236 · January 30, 2015

Noisy splicing drives mRNA isoform diversity in human cells.

Pickrell, J.K., Pai, A.A., Gilad, Y., Pritchard, J.K.

Nature 464, 768—772 · January 30, 2015

Understanding mechanisms underlying human gene expression variation with RNA sequencing.

Pickrell, J.K., Marioni, J.C., Pai, A.A., Degner, J.F., Engelhardt, B.E., Nkadori, E., Veyrieras, J.-B., Stephens, M., Gilad, Y., Pritchard, J.K.

Proc Natl Acad Sci U S A 93, 4529-4536. PMC39311 · January 30, 2015

Onconeural antigens and the paraneoplastic neurologic disorders: at the intersection of cancer, immunity, and the brain.

Darnell, R. B.

Nat Med 4, 1321-1324 · January 30, 2015

Tumor-specific killer cells in paraneoplastic cerebellar degeneration.

Albert, M. L., Darnell, J. C., Bender, A., Francisco, L. M., Bhardwaj, N. & Darnell, R. B.

Science 302, 1212-1215 · January 30, 2015

CLIP identifies Nova-regulated RNA networks in the brain.

Ule, J., Jensen, K. B., Ruggiu, M., Mele, A., Ule, A. & Darnell, R. B.

N Engl J Med 349, 1543-1554 · January 30, 2015

Paraneoplastic syndromes involving the nervous system.

Darnell, R. B. & Posner, J. B.

Prostate Cancer Prostatic Dis 7, 63-72 · January 30, 2015

Effective antigen cross-presentation by prostate cancer patients’ dendritic cells: implications for prostate cancer immunotherapy.

Orange, D. E., Jegathesan, M., Blachere, N. E., Frank, M. O., Scher, H. I., Albert, M. L. & Darnell, R. B.

Nature 456, 464-469 · January 30, 2015

HITS-CLIP yields genome-wide insights into brain alternative RNA processing.

Licatalosi, D. D., Mele, A., Fak, J. J., Ule, J., Kayikci, M., Chi, S. W., Clark, T. A., Schweitzer, A. C., Blume, J. E., Wang, X., Darnell, J. C. & Darnell, R. B.

Nature 460, 479-486. PMC2733940 · January 30, 2015

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.

Chi, S. W., Zang, J. B., Mele, A. & Darnell, R. B.

PLoS One 5. PMC2931687 · January 30, 2015

Harnessing naturally occurring tumor immunity: a clinical vaccine trial in prostate cancer.

Frank, M. O., Kaufman, J., Tian, S., Suarez-Farinas, M., Parveen, S., Blachere, N. E., Morris, M. J., Slovin, S., Scher, H. I., Albert, M. L. & Darnell, R. B.

Wiley Interdiscip Rev RNA 1, 266-286 · January 30, 2015

HITS-CLIP: panoramic views of protein-RNA regulation in living cells.

Darnell, R. B.

Neuron 66, 848-858 · January 30, 2015

Nova2 regulates neuronal migration through an RNA switch in disabled-1 signaling.

Yano, M., Hayakawa-Yano, Y., Mele, A. & Darnell, R. B.

Front Neural Circuits 4, 5. PMC2856630 · January 30, 2015

The neuronal splicing factor Nova co-localizes with target RNAs in the dendrite.

Racca, C., Gardiol, A., Eom, T., Ule, J., Triller, A. & Darnell, R. B.

Cell 146, 247-261 · January 30, 2015

FMRP Stalls Ribosomal Translocation on mRNAs Linked to Synaptic Function and Autism.

Darnell, J. C., Van Driesche, S. J., Zhang, C., Hung, K. Y., Mele, A., Fraser, C. E., Stone, E. F., Chen, C., Fak, J. J., Chi, S. W., Licatalosi, D. D., Richter, J. D. & Darnell, R. B.

Genes Dev 26, 1626-1642. PMC3404389 · January 30, 2015

Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain.

Licatalosi, D. D., Yano, M., Fak, J. J., Mele, A., Grabinski, S. E., Zhang, C. & Darnell, R. B.

Neuron 75, 1067-1080 · January 30, 2015

Neuronal Elav-like (Hu) Proteins Regulate RNA Splicing and Abundance to Control Glutamate Levels and Neuronal Excitability.

Ince-Dunn, G., Okano, H. J., Jensen, K. B., Park, W. Y., Zhong, R., Ule, J., Mele, A., Fak, J. J., Yang, C., Zhang, C., Yoo, J., Herre, M., Okano, H., Noebels, J. L. & Darnell, R. B.

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