Our Scientific Publications
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JAMA Surgery. · March 6, 2024
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Nature Aging. · February 21, 2024
Leveraging electronic health records and knowledge networks for Alzheimer’s disease prediction and sex-specific biological insights.
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bioRxiv. · February 11, 2024 · Pre-Print
The Genotype and Phenotypes in Families (GPF) platform manages the large and complex data at SFARI.
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Nature Biotechnology. · February 9, 2024
Simultaneous single-cell analysis of 5mC and 5hmC with SIMPLE-seq.
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Annals of the American Thoracic Society. · February 8, 2024
Peripheral Blood Mononuclear Cell Gene Expression Associated with Pulmonary Microvascular Perfusion: The Multi-Ethnic Study of Atherosclerosis Chronic Obstructive Pulmonary Disease Study.
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Muscle & Nerve. · February 2, 2024
Identification of gene fusions associated with amyotrophic lateral sclerosis.
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bioRxiv. · January 29, 2024 · Pre-Print
Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens.
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EMBO Reports · January 16, 2024
Osteocalcin of maternal and embryonic origins synergize to establish homeostasis in offspring.
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Cancer Discovery · January 12, 2024
Jak2V617F Reversible Activation Shows Its Essential Requirement in Myeloproliferative Neoplasms.
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bioRxiv · January 12, 2024 · Pre-Print
Comparative analysis of multiplexed in situ gene expression profiling technologies.
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American Journal of Human Genetics · January 4, 2023
Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects.
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CA Cancer J Clin · January 4, 2024
Interpreting and integrating genomic tests results in clinical cancer care: Overview and practical guidance.
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bioRxiv · December 31, 2023 · Pre-Print
Specifying cellular context of transcription factor regulons for exploring context-specific gene regulation programs.
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bioRxiv · December 26, 2023 · Pre-Print
CRISPRmap: Sequencing-free optical pooled screens mapping multi-omic phenotypes in cells and tissue.
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BMC Genomics · December 19, 2023
Evaluation of noninvasive biospecimens for transcriptome studies.
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Genome Biology · December 18, 2023
Smoother: a unified and modular framework for incorporating structural dependency in spatial omics data.
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Nature Communications · December 15, 2023
Essential transcription factors for induced neuron differentiation.
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Genome Research · December 14, 2023
Assessing and mitigating privacy risk of sparse, noisy genotypes by local alignment to haplotype databases.
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Cell Stem Cell · December 7, 2023
SON is an essential m6A target for hematopoietic stem cell fate.
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Neuron · December 6, 2023
A reproducible signature of cytoskeletal and ALS-related genes in human motoneurons.
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Cancer Discovery · December 5, 2023
Cancer Evolution: A Multifaceted Affair.