Publication > Page 76
  • Genome Biology  ·  September 18, 2015

    Tools and best practices for data processing in allelic expression analysis.

    Stephane E. Castel, Ami Levy-Moonshine, Pejman Mohammadi, Eric Banks and Tuuli Lappalainen

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  • Annals of Neurology  ·  August 4, 2015

    A destructive feedback loop mediated by CXCL10 in CNS inflammatory disease.

    Wendy K. Roberts, Ph.D., Nathalie E. Blachère, Ph.D., Mayu O. Frank, M.S., Athanasios Dousmanis, M.D., Ph.D., Richard M. Ransohoff, M.D., Robert B. Darnell, M.D., Ph.D.

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  • Nat Methods  ·  July 6, 2015

    G&T-seq: parallel sequencing of single-cell genomes and transcriptomes.

    Macaulay IC, Haerty W, Kumar P, Li YI, Hu TX, Teng MJ, Goolam M, Saurat N, Coupland P, Shirley LM, Smith M, Van der Aa N, Banerjee R, Ellis PD, Quail MA, Swerdlow HP, Zernicka-Goetz M, Livesey FJ, Ponting CP, Voet T.

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  • JAMA Oncology  ·  July 1, 2015

    Whole-Exome Sequencing of Metastatic Cancer and Biomarkers of Treatment Response.

    Beltran H, Eng K, Mosquera JM, Sigaras A, Romanel A, Rennert H, Kossai M, Paul C, Faltas B, Fontugne J, Park K, Banfelder J, Prandi D, Madhukar N, Zhang T, Padilla J, Greco N, McNary TJ, Herrscher E, Wilkes D, MacDonald TY, Xue H, Vacic V, Emde AK, Oschwald D, Tan AY, Collins C, Gleave ME, Wang Y, Chakravarty D, Schiffman M, Kim R, Robinson BD, Nanus DM, Tagawa ST, Campagne F, Xiang JZ, Smogorzewska A, Demichelis F, Rickman D, Sboner A, Elemento O, Rubin MA.

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  • Cell  ·  July 1, 2015

    Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.

    Macosko EZ, Basu A, Satija R, Nemesh J, Shekhar K, Goldman M, Tirosh I, Bialas AR, Kamitaki N, Martersteck EM, Trombetta JJ, Weitz DA, Sanes JR, Shalek AK, Regev A, McCarroll SA.

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  • The Journal of Infectious Diseases  ·  June 23, 2015

    Loss of Microbiota-Mediated Colonization Resistance to Clostridium difficile Infection With Oral Vancomycin Compared With Metronidazole.

    Lewis BB, Buffie CG, Carter RA, Leiner I, Toussaint NC, Miller LC, Gobourne A, Ling L, Pamer EG.

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  • PLoS ONE  ·  June 23, 2015

    Gut Microbiota and Tacrolimus Dosing in Kidney Transplantation.

    Lee JR, Muthukumar T, Dadhania D, Taur Y, Jenq RR, Toussaint NC, Ling L, Pamer EG, Suthanthiran M.

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  • Genome Research  ·  May 27, 2015

    The landscape of genomic imprinting across diverse adult human tissues

    Baran Y, Subramaniam M, Biton A, Tukiainen T, Tsang EK, Rivas MA, Pirinen M, Gutierrez-Arcelus M, Smith KS, Kukurba KR, Zhang R, Eng C, Torgerson DG, Urbanek C; GTEx Consortium, Li JB, Rodriguez-Santana JR, Burchard EG, Seibold MA, MacArthur DG, Montgomery SB, Zaitlen NA, Lappalainen T.

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  • Science  ·  May 27, 2015

    Impact of predicted protein-truncating genetic variants on the human transcriptome.

    Rivas MA, Pirinen M, Conrad DF, Lek M, Tsang EK, Karczewski KJ, Maller JB, Kukurba KR, DeLuca D, Fromer M, Ferreira P, Smith KS, Zhang R, Zhao F, Banks E, Poplin R, Ruderfer D, Stenson PD, Cooper DN, Consortium TG, Consortium TG, Bustamante CD, Li JB, Daly MJ, Guigo R, Donnelly P, Ardlie K, Sammeth M, Dermitzakis ET, McCarthy MI, Montgomery SB, Lappalainen T, MacArthur DG.

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  • Science  ·  May 27, 2015

    The human transcriptome across tissues and individuals

    Melé M, Ferreira PG, Reverter F, DeLuca DS, Monlong J, Sammeth M, Young TR, Goldmann JM, Pervouchine DD, Sullivan TJ, Johnson R, Segrè AV, Djebali S, Niarchou A, The GTEx Consortium, Wright FA, Lappalainen T, Calvo M, Getz G, Dermitzakis ET, Ardlie KG, Guigó R.

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