Publication Archives - Page 75 of 81 - New York Genome Center

PNAS · September 25, 2015

Low load for disruptive mutations in autism genes and their biased transmission.

Ivan Iossifov, Dan Levya, Jeremy Allena, Kenny Yec, Michael Ronemusa, Yoon-ha Leea, Boris Yamroma, Michael Wigler.

Iossifov Lab

Neuron · September 25, 2015

De Novo Gene Disruptions in Children on the Autistic Spectrum.

Ivan Iossifov, Michael Ronemus, Dan Levy, Zihua Wang, Inessa Hakker, Julie Rosenbaum, Boris Yamrom, Yoon-ha Lee, Giuseppe Narzisi, Anthony Leotta, Jude Kendall, Ewa Grabowska, Beicong Ma, Steven Marks, Linda Rodgers, Asya Stepansky, Jennifer Troge, Peter Andrews, Mitchell Bekritsky, Kith Pradhan, Elena Ghiban, Melissa Kramer, Jennifer Parla, Ryan Demeter, Lucinda L. Fulton, Robert S. Fulton, Vincent J. Magrini, Kenny Ye, Jennifer C. Darnell, Robert B. Darnell, Elaine R. Mardis, Richard K. Wilson, Michael C. Schatz, W. Richard McCombie, and Michael Wigler.

Iossifov Lab

Genes & Dev · September 25, 2015

A majority of m6A residues are in the last exons, allowing the potential for 3′ UTR regulation.

Shengdong Ke, Endalkachew A. Alemu, Claudia Mertens, Emily Conn Gantman, John J. Fak, Aldo Mele, Bhagwattie Haripal, Ilana Zucker-Scharff, Michael J. Moore, Christopher Y. Park, Cathrine Broberg Vågbø, Anna Kus´nierczyk, Arne Klungland, James E. Darnell Jr., Robert B. Darnell.

Bioinformatics. Epub · September 22, 2015

Approximately independent linkage disequilibrium blocks in human populations.

Berisa T, Pickrell JK.

Genome Biology · September 18, 2015

Tools and best practices for data processing in allelic expression analysis.

Stephane E. Castel, Ami Levy-Moonshine, Pejman Mohammadi, Eric Banks and Tuuli Lappalainen

Lappalainen Lab

Annals of Neurology · August 4, 2015

A destructive feedback loop mediated by CXCL10 in CNS inflammatory disease.

Wendy K. Roberts, Ph.D., Nathalie E. Blachère, Ph.D., Mayu O. Frank, M.S., Athanasios Dousmanis, M.D., Ph.D., Richard M. Ransohoff, M.D., Robert B. Darnell, M.D., Ph.D.

Nat Methods · July 6, 2015

G&T-seq: parallel sequencing of single-cell genomes and transcriptomes.

Macaulay IC, Haerty W, Kumar P, Li YI, Hu TX, Teng MJ, Goolam M, Saurat N, Coupland P, Shirley LM, Smith M, Van der Aa N, Banerjee R, Ellis PD, Quail MA, Swerdlow HP, Zernicka-Goetz M, Livesey FJ, Ponting CP, Voet T.

JAMA Oncology · July 1, 2015

Whole-Exome Sequencing of Metastatic Cancer and Biomarkers of Treatment Response.

Beltran H, Eng K, Mosquera JM, Sigaras A, Romanel A, Rennert H, Kossai M, Paul C, Faltas B, Fontugne J, Park K, Banfelder J, Prandi D, Madhukar N, Zhang T, Padilla J, Greco N, McNary TJ, Herrscher E, Wilkes D, MacDonald TY, Xue H, Vacic V, Emde AK, Oschwald D, Tan AY, Collins C, Gleave ME, Wang Y, Chakravarty D, Schiffman M, Kim R, Robinson BD, Nanus DM, Tagawa ST, Campagne F, Xiang JZ, Smogorzewska A, Demichelis F, Rickman D, Sboner A, Elemento O, Rubin MA.

Cell · July 1, 2015

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.

Macosko EZ, Basu A, Satija R, Nemesh J, Shekhar K, Goldman M, Tirosh I, Bialas AR, Kamitaki N, Martersteck EM, Trombetta JJ, Weitz DA, Sanes JR, Shalek AK, Regev A, McCarroll SA.

The Journal of Infectious Diseases · June 23, 2015

Loss of Microbiota-Mediated Colonization Resistance to Clostridium difficile Infection With Oral Vancomycin Compared With Metronidazole.

Lewis BB, Buffie CG, Carter RA, Leiner I, Toussaint NC, Miller LC, Gobourne A, Ling L, Pamer EG.