Publication Archives - Page 28 of 68 - New York Genome Center

American Journal of Human Genetics · December 2, 2021

Welch-weighted Egger regression reduces false positives due to correlated pleiotropy in Mendelian randomization.

Brielin C Brown, David A Knowles

Biology, Genomics & Technology

Computational Biology Lab

Technology Innovation

Molecular Psychiatry · November 19, 2021

The benefit of diagnostic whole genome sequencing in schizophrenia and other psychotic disorders.

Alkelai A, Greenbaum L, Docherty AR, Shabalin AA, Povysil G, Malakar A, Hughes D, Delaney SL, Peabody EP, McNamara J, Gelfman S, Baugh EH, Zoghbi AW, Harms MB, Hwang HS, Grossman-Jonish A, Aggarwal V, Heinzen EL, Jobanputra V, Pulver AE, Lerer B, Goldstein DB.

Biology, Genomics & Technology

Neuropsychiatric Disease

Computational Biology Lab Clinical Genetics

Microbiology Spectrum · November 17, 2021

Postvaccination SARS-COV-2 among Health Care Workers in New Jersey: A Genomic Epidemiological Study.

Barun Mathema, Liang Chen, Kar Fai Chow, Yanan Zhao, Michael C Zody, Jose R Mediavilla, Marcus H Cunningham, Kaelea Composto, Annie Lee, Dayna M Oschwald, Soren Germer, Samantha Fennessey, Kishan Patel, David Wilson, Ann Cassell, Lauren Pascual, Andrew Ip, André Corvelo, Sophia Dar, Yael Kramer, Tom Maniatis, David S Perlin, Barry N Kreiswirth

Maniatis Lab

Biology, Genomics & Technology

Computational Biology Lab

The Plant Cell · November 15, 2021

Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems.

Simon C Groen, Zoe Joly-Lopez, Adrian E Platts, Mignon Natividad, Zoe Fresquez, William M Mauck III, Marinell R Quintana, Carlo LU Cabral, Rolando O Torres, Rahul Satija, Michael D Purugganan, Amelia Henry

Satija Lab

Biology, Genomics & Technology

Nature Methods · November 1, 2021

Single-cell chromatin state analysis with Signac.

Tim Stuart, Avi Srivastava, Shaista Madad, Caleb A. Lareau & Rahul Satija

Satija Lab

Biology, Genomics & Technology

Technology Innovation

Fertility and Sterility · November 1, 2021

Embryonic lethal genetic variants and chromosomally normal pregnancy loss.

Jennie Kline, Badri Vardarajan, Avinash Abhyankar, Sonja Kytömaa, Bruce Levin, Nara Sobreira, Andrew Tang, Amanda Thomas-Wilson, Ruiwei Zhang, Vaidehi Jobanputra

Cancer

Biology, Genomics & Technology

Neurodegenerative Disease

Neuropsychiatric Disease

Computational Biology Lab

Technology Innovation Clinical Genetics

Genes · October 30, 2021

Molecular Classification and Interpretation of Amyotrophic Lateral Sclerosis Using Deep Convolution Neural Networks and Shapley Values.

Abdul Karim, Zheng Su, Phillip K. West, Matthew Keon, The NYGC ALS Consortium, Jannah Shamsani, Samuel Brennan, Ted Wong, Ognjen Milicevic, Guus Teunisse, Hima Nikafshan Rad and Abdul Sattar

Phatnani Lab

Neurodegenerative Disease

iScience · October 29, 2021

Automated design of CRISPR prime editors for thousands of human pathogenic variants.

John A Morris, Jahan A Rahman, Xinyi Guo, Neville E Sanjana

Sanjana Lab

Biology, Genomics & Technology

Computational Biology Lab

Technology Innovation

Med · October 8, 2021

Lightning does strike twice: leveraging phased variants to enhance minimal residual disease detection.

Alexandre P. Cheng, Dan A. Landau

Landau Lab

Cancer

Biology, Genomics & Technology

Computational Biology Lab

PLOS Biology · October 7, 2021

A field guide to cultivating computational biology.

Way GP, Greene CS, Carninci P, Carvalho BS, de Hoon M, Finley SD, Gosline SJC, Lȇ Cao KA, Lee JSH, Marchionni L, Robine N, Sindi SS, Theis FJ, Yang JYH, Carpenter AE, Fertig EJ.

Biology, Genomics & Technology

Computational Biology Lab