Publication Archives - Page 11 of 81 - New York Genome Center

Genome Research · August 21, 2025

Estimating the size of long tandem repeat expansions from short reads with ScatTR.

Rashid Al-Abri, Gamze Gursoy.

Critical Reviews in Oncology/Hematology · August 20, 2025

Targeting cancer metabolism: Therapeutic potential of the fatty acid synthase (FASN) inhibitors.

Pier Vitale Nuzzo, Silvia Rodrigues, Caroline Fidalgo Ribeiro, Isadora Ferrari Teixeira, Giuseppe Nicolo’ Fanelli, Sara Bleve, Francesco Ravera, Hubert Pakula, Filippo Pederzoli, David M Nanus, Massimo Loda.

Cancer

Clinical Cancer Research · August 20, 2025

Evolution and co-occurrence of PI3K pathway gene mutations in endometrial carcinoma molecular subtypes at the single-cell level.

Arnaud Da Cruz Paula, Yingjie Zhu, David N Brown, Shirin Issa Bhaloo, Fresia Pareja, Timothy J Hoang, Hunter Green, Thais Basili, Higinio Dopeso, Pier Selenica, Edaise M da Silva, Nadeem Riaz, Sarat Chandarlapaty, Nadeem R Abu-Rustum, Jorge S Reis-Filho, Britta Weigelt.

Technology Development

European Heart Journal · August 19, 2025

LIPA, a risk locus for coronary artery disease: decoding the variant-to-function relationship.

Fang Li, Elise Flynn, Philip Ha, Mazal N Zebak, Haoxiang Cheng, Chenyi Xue, Jianting Shi, Xun Wu, Ziyi Wang, Yujiao Meng, Jian Cui, Yizhou Zhu, Annie Rozenblyum, Jeana Chun, Antonio Hernandez-Ono, Ali Javaheri, Babak Razani, Marit Westerterp, Robert C Bauer, Yousin Suh, Ke Hao, Tuuli Lappalainen, Hanrui Zhang.

Lappalainen Lab

Nature Communications · August 12, 2025

Improving reproducibility of differentially expressed genes in single-cell transcriptomic studies of neurodegenerative diseases through meta-analysis.

Nathan Nakatsuka, Drew Adler, Longda Jiang, Austin Hartman, Evan Cheng, Eric Klann, Rahul Satija.

Satija Lab

Neurodegenerative Disease

Science · August 7, 2025

Predicting expression-altering promoter mutations with deep learning.

Kishore Jaganathan, Nicole Ersaro, Gherman Novakovsky, Yuchuan Wang, Terena James, Jeremy Schwartzentruber, Petko Fiziev, Irfahan Kassam, Fan Cao, Johann Hawe, Henry Cavanagh, Ashley Lim, Grace Png, Jeremy McRae, Abhimanyu Banerjee, Arvind Kumar, Jacob Ulirsch, Yan Zhang, Francois Aguet, Pierrick Wainschtein, Laksshman Sundaram, Adriana Salcedo, Sofia Kyriazopoulou Panagiotopoulou, Delasa Aghamirzaie, Evin Padhi, Ziming Weng, Shan Dong, Damian Smedley, Mark Caulfield, Anne O’Donnell-Luria, Heidi L Rehm, Stephan J Sanders, Anshul Kundaje, Stephen B Montgomery, Mark T Ross, Kyle Kai-How Farh.

Sanders Lab

Frontiers in Systems Biology · July 2, 2025

Learning Gaussian Graphical Models from Correlated Data.

Zeyuan Song, Sophia Gunn, Stefano Monti, Gina Marie Peloso, Ching-Ti Liu, Kathryn Lunetta, Paola Sebastiani.

Singh Lab

Neuropsychiatric Disease

JAMA Internal Medicine · August 1, 2025

Diseases Common in Persons With Cystic Fibrosis Among CFTR Heterozygotes.

Chenjie Zeng, Sangwoo T Han, Thomas A Cassini, Karen S Raraigh, Tam C Tran, James Yang, Garry R Cutting, Joshua C Denny.

Clinical Lab

Genetics in Medicine · July 2, 2025

Venous thromboembolism laboratory testing (factor V Leiden and factor II c.∗97G>A), 2025 revision: A technical standard of the American College of Medical Genetics and Genomics (ACMG).

Benjamin E Kang, Shulin Zhang, Harry Lesmana, Jeffrey Dungan, Kara Reynolds, Saurav Guha, Hunter Best.

Clinical Lab

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging · August 1, 2025

Deriving Mendelian Randomization-based Causal Networks of Brain Imaging Phenotypes and Bipolar Disorder.

Shane O’Connell, Brielin C Brown, Dara M Cannon, Pilib Ó Broin, Nadine Parker, Dag Alnæs, Lars T Westlye, Saikat Banerjee, Leila Nabulsi, Emma Corley, Ole A Andreassen, David A Knowles, Niamh Mullins.

Knowles Lab

Neuropsychiatric Disease