Our Scientific Publications
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American Journal of Human Genetics · January 25, 2021
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Bioinformatics · January 20, 2021
Compression of quantification uncertainty for scRNA-seq counts.
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bioRxiv · January 19, 2021 · Preprint
Accounting for fragments of unexpected origin improves transcript quantification in RNA-seq simulations focused on increased realism.
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bioRxiv · January 14, 2021 · Preprint
An Effector Index to Predict Causal Genes at GWAS Loci
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Trials · January 14, 2021
The NYCKidSeq project: study protocol for a randomized controlled trial incorporating genomics into the clinical care of diverse New York City children.
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bioRxiv · January 11, 2021 · Preprint
The landscape of human brain immune response in patients with severe COVID-19.
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PLOS Computational Biology · January 11, 2021
Preprocessing choices affect RNA velocity results for droplet scRNA-seq data.
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Current Opinion in Genetics & Development · January 9, 2021
Spatially resolved transcriptomics and its applications in cancer.
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Nature Structural & Molecular Biology · January 4, 2021
Structural and functional characterization of the Spo11 core complex.
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Nature Methods · January 4, 2021
Quantum computing at the frontiers of biological sciences.
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J Am Acad Child Adolesc Psychiatry · December 28, 2020
Genetic Studies of Mental Illness: Are Children Being Left Behind?
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bioRxiv · December 24, 2020 · Preprint
Single cell analysis of blood mononuclear cells stimulated through CD3 and CD28 shows collateral activation of B and NK cells and demise of monocytes.
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JAMA Surg · December 23, 2020
A Genomic-Pathologic Annotated Risk Model to Predict Recurrence in Early-Stage Lung Adenocarcinoma.
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npj Genomic Medicine · December 15, 2020
Clinical utility of genomic sequencing: a measurement toolkit.
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bioRxiv · December 14, 2020 · Preprint
The SEQC2 Epigenomics Quality Control (EpiQC) Study: Comprehensive Characterization of Epigenetic Methods, Reproducibility, and Quantification.
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Nature · December 9, 2020
Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture.
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Neuron · November 26, 2020
Pathogenic Huntingtin Repeat Expansions in Patients with Frontotemporal Dementia and Amyotrophic Lateral Sclerosis.
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PLoS One · November 25, 2020
Asthma and its relationship to mitochondrial copy number: Results from the Asthma Translational Genomics Collaborative (ATGC) of the Trans-Omics for Precision Medicine (TOPMed) program.
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bioRxiv · November 23, 2020
The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes.
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Molecular Cell · November 19, 2020
Impact of Lineage Plasticity to and from a Neuroendocrine Phenotype on Progression and Response in Prostate and Lung Cancers.
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bioRxiv · November 12, 2020 · Preprint
Pangenome-based genome inference.