Publications

101
Results
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Nature Biotechnology. 2023 Nov 20.
Spatial host–microbiome sequencing reveals niches in the mouse gut.
Nature Genetics. 2023 Nov. 9.
Most large structural variants in cancer genomes can be detected without long reads.
Science. 2023 May 19.
Discovery of target genes and pathways at GWAS loci by pooled single-cell CRISPR screens.
Nature Methods. 2023 March 02.
In silico tissue generation and power analysis for spatial omics.
Genome Biology. 2022 June 29.
Storing and analyzing a genome on a blockchain.
Annual Review of Biomedical Data Science. 2022 May 4.
Genome Privacy and Trust.
Cell Genomics. 2022 Apr. 28.
Benchmarking challenging small variants with linked and long reads.
npj Genomic Medicine. 2022 Apr. 8.
Best practices for the interpretation and reporting of clinical whole genome sequencing.
Nature Biotechnology. 2022 March 24.
Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro
Scientific Reports. 2022 March 24.
An open source toolkit for repurposing Illumina sequencing systems as versatile fluidics and imaging platforms.
Trends in Cancer. 2021 Dec. 9.
New York’s Polyethnic-1000: a regional initiative to understand how diverse ancestries influence the risk, progression, and treatment of cancers.
American Journal of Human Genetics. 2021 Dec. 2.
Welch-weighted Egger regression reduces false positives due to correlated pleiotropy in Mendelian randomization.
Nature Methods. 2021`Nov. 1.
Single-cell chromatin state analysis with Signac.
Fertility and Sterility. 2021 Nov.
Embryonic lethal genetic variants and chromosomally normal pregnancy loss.
iScience. 2021 Oct. 29.
Automated design of CRISPR prime editors for thousands of human pathogenic variants.
Science. 2021 Sept. 24.
From variant to function in human disease genetics.
American Journal of Human Genetics. 2021 Sept. 27.
An integrated approach to identify environmental modulators of genetic risk factors for complex traits.
Nature Communications. 2021 Sept. 13.