Publications

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Cancer Discovery. 2023 March 17.
Single-cell RNA sequencing unifies developmental programs of Esophageal and Gastric Intestinal Metaplasia.
Blood Cancer Discovery. 2023 Feb. 1.
Molecular evolution of classic Hodgkin lymphoma revealed through whole genome sequencing of Hodgkin and Reed Sternberg cells.
Cold Spring Harbor Molecular Case Studies. 2022 Dec. 28.
Whole-genome characterization of myoepithelial carcinomas of the soft tissue.
Nature Methods 2022 Dec. 22.
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq.
Nature. 2022 Dec. 14.
Recurrent repeat expansions in human cancer genomes.
JCO Precision Oncology. 2022 Dec. 8.
Implementation of Whole-Genome and Transcriptome Sequencing Into Clinical Cancer Care.
Nature. 2022 Nov. 30.
Genomic signature of Fanconi anaemia DNA repair pathway deficiency in cancer.
ACS Synthetic Biology. 2022 Nov. 15.
Expanding the Scope of Bacterial CRISPR Activation with PAM-Flexible dCas9 Variants.
Nature Genetics. 2022 Sept. 22.
Single-cell multi-omics of human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation.
AACR Journals. 2022 Sept. 19.
African Ancestry Associated Gene Expression Profiles in Triple Negative Breast Cancer Underlie Altered Tumor Biology and Clinical Outcome in Women of African Descent.
Methods in Molecular Biology. 2022 Sept. 11.
Ligand Identification for Orphan MHC-Agnostic T-Cell Receptors by Whole Genome CRISPR–Cas9 Screening.
Nature Communications. 2022 Aug. 5.
Recurrent somatic mutations as predictors of immunotherapy response.
Cell Reports. 2022 Aug. 02.
Cancer genes disfavoring T cell immunity identified via integrated systems approach.
Nature Communications. 2022 June 13.
Gene expression signatures of individual ductal carcinoma in situ lesions identify processes and biomarkers associated with progression towards invasive ductal carcinoma.
Nature Biotechnology. 2022 May 30.
Identifying synergistic high-order 3D chromatin conformations from genome-scale nanopore concatemer sequencing.
Nature Communications. 2022 Apr. 28.
Somatic whole genome dynamics of precancer in Barrett’s esophagus reveals features associated with disease progression.
Nature. 2022 March 16.
A genome-scale screen for synthetic drivers of T cell proliferation.
Blood. 2022 Feb. 24