Publications

4 Results (Filters Applied)

Gürsoy Lab x

Bioinformatics. 2023 Feb. 16.

LDmat: Efficiently Queryable Compression of Linkage Disequilibrium Matrices.

Rockwell J Weiner, Chirag Lakhani, David A Knowles, Gamze Gürsoy

Nature. 2022 Dec. 14.

Recurrent repeat expansions in human cancer genomes.

Graham S. Erwin, Gamze Gürsoy, Rashid Al-Abri, Ashwini Suriyaprakash, Egor Dolzhenko, Kevin Zhu, Christian R. Hoerner, Shannon M. White, Lucia Ramirez, Ananya Vadlakonda, Alekhya Vadlakonda, Konor von Kraut, Julia Park, Charlotte M. Brannon, Daniel A. Sumano, Raushun A. Kirtikar, Alicia A. Erwin, Thomas J. Metzner, Ryan K. C. Yuen, Alice C. Fan, John T. Leppert, Michael A. Eberle, Mark Gerstein & Michael P. Snyder

Genome Biology. 2022 June 29.

Storing and analyzing a genome on a blockchain.

Gamze Gürsoy, Charlotte M. Brannon, Eric Ni, Sarah Wagner, Amol Khanna & Mark Gerstein

Annual Review of Biomedical Data Science. 2022 May 4.

Genome Privacy and Trust.

Gamze Gürsoy

PRE-PRINT PUBLICATIONS

bioRxiv. 2022 Aug. 30.

Assessing and mitigating privacy risk of sparse, noisy genotypes by local alignment to haplotype databases.

Prashant S. Emani, Gamze Gürsoy, Andrew Miranker, Mark B. Gerstein

bioRxiv. 2022 Apr. 19.

Predicting A/B compartments from histone modifications using deep learning.

Suchen Zheng, Nitya Thakkar, Hannah L. Harris, Megan Zhang, Susanna Liu, Mark Gerstein, Erez Lieberman-Aiden, M. Jordan Rowley, William Stafford Noble, Gamze Gürsoy, Ritambhara Singh

Faculty Labs

NYGC Labs

Publications

LDmat: Efficiently Queryable Compression of Linkage Disequilibrium Matrices.

Recurrent repeat expansions in human cancer genomes.

Storing and analyzing a genome on a blockchain.

Genome Privacy and Trust.