Publication Archives - Page 54 of 80 - New York Genome Center

Cell · December 12, 2019

Toward a Common Coordinate Framework for the Human Body.

Jennifer E. Rood, Tim Stuart, Shila Ghazanfar, Tommaso Biancalani, Eyal Fisher, Andrew Butler, Anna Hupalowska, Leslie Gaffney, William Mauck, Gökçen Eraslan, John C. Marioni, Aviv Regev, Rahul Satija.

Satija Lab

Nature Neuroscience · November 25, 2019

Exome sequencing in amyotrophic lateral sclerosis implicates a novel gene, DNAJC7, encoding a heat-shock protein.

Farhan SMK, Howrigan DP, Abbott LE, Klim JR, Topp SD, Byrnes AE, Churchhouse C, Phatnani H, Smith BN, Rampersaud E, Wu G, Wuu J, Shatunov A, Iacoangeli A, Al Khleifat A, Mordes DA, Ghosh S; ALSGENS Consortium; FALS Consortium; Project MinE Consortium; CReATe Consortium, Eggan K, Rademakers R, McCauley JL, Schüle R, Züchner S, Benatar M, Taylor JP, Nalls M, Gotkine M, Shaw PJ, Morrison KE, Al-Chalabi A, Traynor B, Shaw CE, Goldstein DB, Harms MB, Daly MJ, Neale BM.

Phatnani Lab

Neurodegenerative Disease

Genome Biology · November 21, 2019

EpiMethylTag simultaneously detects ATAC-seq or ChIP-seq signals with DNA methylation.

, Gunjan Sethia, Izzo F, Sana Badri, MacIntosh Cornwell, Kim K-T, Landau D, Jane Skok

Landau Lab

PNAS · November 20, 2019

Effects of ALS-associated TANK binding kinase 1 mutations on protein–protein interactions and kinase activity

Junqiang Ye, Jonah Cheung, Valeria Gerbino, Göran Ahlsén, Christina Zimanyi, David Hirsh, and Tom Maniatis

Maniatis Lab

Neurodegenerative Disease

Journal of Heredity · November 14, 2019

Adaptive Radiation Genomics of Two Ecologically Divergent Hawai‘ian Honeycreepers: The ‘akiapōlā‘au and the Hawai‘i ‘amakihi.

Michael G Campana, André Corvelo, Jennifer Shelton, Taylor E Callicrate, Karen L Bunting, Bridget Riley-Gillis, Frank Wos, Justin DeGrazia, Erich D Jarvis, Robert C Fleischer

Computational Biology Lab

Molecular Biology and Evolution · November 8, 2019

Phylogenomics identifies an ancestral burst of gene duplications predating the diversification of aphidomorpha.

Irene Julca, Marina Marcet-Houben, Fernando Cruz, Carlos Vargas-Chavez, J Spencer Johnston, Jèssica Gómez-Garrido, Leonor Frias, André Corvelo, Damian Loska, Francisco Cámara, Marta Gut, Tyler Alioto, Amparo Latorre, Toni Gabaldón

Computational Biology Lab

Genome Biology · November 4, 2019

Genetic regulation of gene expression and splicing during a 10-year period of human aging.

Balliu B, Durrant M, Goede O, Abell N, Li X, Liu B, Gloudemans MJ, Cook NL, Smith KS, Knowles DA, Pala M, Cucca F, Schlessinger D, Jaiswal S, Sabatti C, Lind L, Ingelsson E, Montgomery SB.

Knowles Lab

Pigment Cell & Melanoma Research · November 2, 2019

Sequencing two Tyr::CreERT2 transgenic mouse lines.

Aktary Z, Corvelo A, Estrin C, Larue L.

Cancer

Computational Biology Lab

Stem Cell Research · November 1, 2019

Generation of a knock-in MAP2-tdTomato reporter human embryonic stem cell line with inducible expression of NEUROG2/1 (NYGCe001-A).

Lu C, Sanjana NE.

Sanjana Lab

Cell Reports · October 29, 2019

Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia

Oliver H. Tam, Nikolay V. Rozhkov, Regina Shaw, Duyang Kim, Isabel Hubbard, Samantha Fennessey, Nadia Propp, The NYGC ALS Consortium, Delphine Fagegaltier, Brent T. Harris, Lyle W. Ostrow, Hemali Phatnani, John Ravits, Josh Dubnau, and Molly Gale Hammell

Phatnani Lab

Neurodegenerative Disease