Publication Archives - Page 42 of 80 - New York Genome Center

mSphere · August 25, 2021

Emergence of multiple SARS-CoV-2 antibody escape variants in an immunocompromised host undergoing convalescent plasma treatment.

Liang Chen, Michael C. Zody, Clara Di Germanio, Rachel Martinelli, Jose R. Mediavilla, Marcus H. Cunningham, Kaelea Composto, Kar Fai Chow, Milena Kordalewska, André Corvelo, Dayna M. Oschwald, Samantha Fennessey, Marygrace Zetkulic, Sophia Dar, Yael Kramer, Barun Mathema, Soren Germer, Mars Stone, Graham Simmons, Michael P. Busch, Tom Maniatis, David S. Perlin, and Barry N. Kreiswirth

Biology, Genomics & Technology

Computational Biology Lab

Genome Biology · August 23, 2021

Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus.

, Zharko Daniloski, , Benjamin R. tenOever, Neville E. Sanjana, Tuuli Lappalainen

Lappalainen Lab Sanjana Lab

Biology, Genomics & Technology

Hum Mol Genet · August 20, 2021

Epigenome-wide association study of mitochondrial genome copy number.

Wang P, Castellani CA, Yao J, Huan T, Bielak LF, Zhao W, Haessler J, Roby J, Sun X, Guo X, Longchamps RJ, Manson JE, Grove ML, Bressler J, Taylor KD, Lappalainen T, Kasela S, Van Den Berg DJ, Hou L, Reiner A, Liu Y, Boerwinkle E, Smith JA, Peyser PA, Fornage M, Rich SS, Rotter JI, Kooperberg C, Arking DE, Levy D, Liu C; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium..

Lappalainen Lab

Biology, Genomics & Technology

Computational Biology Lab

npg Genomic Medicine · August 16, 2021

Multiregional genetic evolution of metastatic uveal melanoma.

Rodriguez DA, Yang J, Durante MA, Shoushtari AN, Moschos SJ, Wrzeszczynski KO, Harbour JW, Carvajal RD.

Cancer Clinical Genetics

Nature Reviews Molecular Cell Biology · August 11, 2021

Voices of the new generation: open science is good for science (and for you).

Sanjana NE.

Sanjana Lab

Cancer

Computational Biology Lab

Cold Spring Harb Mol Case Stud · August 6, 2021

Metastatic Pediatric Sclerosing Epithelioid Fibrosarcoma.

Woods AD, Purohit R, Mitchell L, Collier J, Collier K, Lathara M, Learned K, Vaske O, Geiger H, Wrzeszczynski KO, Jobanputra V, Srinivasa G, Rudzinski E, Whelan K, Beierle E, Spunt S, Keller C, Wadhwa A.

Cancer

Biology, Genomics & Technology

Computational Biology Lab Clinical Genetics

Cell Chemical Biology · August 2, 2021

Chemically modified guide RNAs enhance CRISPR-Cas13 knockdown in human cells.

Alejandro Méndez-Mancilla, Hans-Hermann Wessels, Mateusz Legut, Anastasia Kadina, Megumi Mabuchi, John Walker, G. Brett Robb, Kevin Holden, Neville E Sanjana

Sanjana Lab

Biology, Genomics & Technology

Computational Biology Lab

PLoS Genet · July 27, 2021

An autoimmune disease risk variant: A trans master regulatory effect mediated by IRF1 under immune stimulation?

Brandt M, Kim-Hellmuth S, Ziosi M, Gokden A, Wolman A, Lam N, Recinos Y, Daniloski Z, Morris JA, Hornung V, Schumacher J, Lappalainen T.

Lappalainen Lab

Biology, Genomics & Technology

Computational Biology Lab

Nature Genetics · July 26, 2021

Recent ultra-rare inherited variants implicate new autism candidate risk genes.

Amy B. Wilfert, Tychele N. Turner, Shwetha C. Murali, PingHsun Hsieh, Arvis Sulovari, Tianyun Wang, Bradley P. Coe, Hui Guo, Kendra Hoekzema, Trygve E. Bakken, Lara H. Winterkorn, Uday S. Evani, Marta Byrska-Bishop, Rachel K. Earl, Raphael A. Bernier, The SPARK Consortium, Michael C. Zody & Evan E. Eichler

Neuropsychiatric Disease

Computational Biology Lab

Genome Medicine · July 19, 2021

Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19.

Fullard JF, Lee HC, Voloudakis G, Suo S, Javidfar B, Shao Z, Peter C, Zhang W, Jiang S, Corvelo A, Wargnier H, Woodoff-Leith E, Purohit DP, Ahuja S, Tsankova NM, Jette N, Hoffman GE, Akbarian S, Fowkes M, Crary JF, Yuan GC, Roussos P.

Biology, Genomics & Technology

Computational Biology Lab